3D structure

PDB id
7TOP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
GUGGCC*GGAAUC
Length
12 nucleotides
Bulged bases
7TOP|1|A25S|G|1236
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7TOP|1|A25S|G|1234
7TOP|1|A25S|U|1235
7TOP|1|A25S|G|1236
7TOP|1|A25S|G|1237
7TOP|1|A25S|C|1238
7TOP|1|A25S|C|1239
*
7TOP|1|A25S|G|1249
7TOP|1|A25S|G|1250
7TOP|1|A25S|A|1251
7TOP|1|A25S|A|1252
7TOP|1|A25S|U|1253
7TOP|1|A25S|C|1254

Current chains

Chain A25S
25S rRNA

Nearby chains

Chain AL12
Ribosomal protein L12

Coloring options:

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