IL_7TOP_146

3D structure

PDB id

7TOP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UCUAGACAGC*GCCGAA

Length

16 nucleotides

Bulged bases

7TOP|1|A25S|U|1220, 7TOP|1|A25S|A|1221

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOP|1|A25S|U|1218
7TOP|1|A25S|C|1219
7TOP|1|A25S|U|1220
7TOP|1|A25S|A|1221
7TOP|1|A25S|G|1222
7TOP|1|A25S|A|1223
7TOP|1|A25S|C|1224
7TOP|1|A25S|A|1225
7TOP|1|A25S|G|1226
7TOP|1|A25S|C|1227
*
7TOP|1|A25S|G|1282
7TOP|1|A25S|C|1283
7TOP|1|A25S|C|1284
7TOP|1|A25S|G|1285
7TOP|1|A25S|A|1286
7TOP|1|A25S|A|1287

Current chains

Chain A25S

25S rRNA

Nearby chains

Chain AL20

60S ribosomal protein L20-A

Chain ALP0

60S acidic ribosomal protein P0