IL_7TOR_031

3D structure

PDB id

7TOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGGGCAAGUC*GCU

Length

13 nucleotides

Bulged bases

7TOR|1|A18S|U|607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOR|1|A18S|A|599
7TOR|1|A18S|G|600
7TOR|1|A18S|G|601
7TOR|1|A18S|G|602
7TOR|1|A18S|C|603
7TOR|1|A18S|A|604
7TOR|1|A18S|A|605
7TOR|1|A18S|G|606
7TOR|1|A18S|U|607
7TOR|1|A18S|C|608
*
7TOR|1|A18S|G|635
7TOR|1|A18S|C|636
7TOR|1|A18S|U|637

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS02

40S ribosomal protein S2

Chain AS03

40S ribosomal protein S3

Chain AS09

40S ribosomal protein S9

Chain AS30

40S ribosomal protein S30