IL_7TOR_034
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUUAAAA*UC
- Length
- 9 nucleotides
- Bulged bases
- 7TOR|1|A18S|A|668
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOR_034 not in the Motif Atlas
- Geometric match to IL_5J7L_026
- Geometric discrepancy: 0.1544
- The information below is about IL_5J7L_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.6
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 4
Unit IDs
7TOR|1|A18S|G|665
7TOR|1|A18S|U|666
7TOR|1|A18S|U|667
7TOR|1|A18S|A|668
7TOR|1|A18S|A|669
7TOR|1|A18S|A|670
7TOR|1|A18S|A|671
*
7TOR|1|A18S|U|1161
7TOR|1|A18S|C|1162
Current chains
- Chain A18S
- 18S rRNA
Nearby chains
- Chain AS02
- 40S ribosomal protein S2
- Chain AS23
- 40S ribosomal protein S23
- Chain AS26
- eS26
Coloring options: