IL_7TOR_062
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GG*CAC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOR_062 not in the Motif Atlas
- Geometric match to IL_4V88_445
- Geometric discrepancy: 0.1726
- The information below is about IL_4V88_445
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_18604.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 46
Unit IDs
7TOR|1|A18S|G|1235
7TOR|1|A18S|G|1236
*
7TOR|1|A18S|C|1521
7TOR|1|A18S|A|1522
7TOR|1|A18S|C|1523
Current chains
- Chain A18S
- 18S rRNA
Nearby chains
- Chain AS15
- 40S ribosomal protein S15
- Chain AS18
- 40S ribosomal protein S18
- Chain PTRN
- Transfer RNA; tRNA
Coloring options: