IL_7TOR_065

3D structure

PDB id

7TOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUG*CUCGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOR|1|A18S|A|1287
7TOR|1|A18S|U|1288
7TOR|1|A18S|U|1289
7TOR|1|A18S|G|1290
*
7TOR|1|A18S|C|1309
7TOR|1|A18S|U|1310
7TOR|1|A18S|C|1311
7TOR|1|A18S|G|1312
7TOR|1|A18S|A|1313
7TOR|1|A18S|U|1314

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS10

40S ribosomal protein S10

Chain AS12

40S ribosomal protein S12

Chain AS29

40S ribosomal protein S29

Chain AS31

40S ribosomal protein S27a