IL_7TOR_126

3D structure

PDB id

7TOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AAGG*CAGCAGCAGCU

Length

15 nucleotides

Bulged bases

7TOR|1|A28S|A|932, 7TOR|1|A28S|A|935, 7TOR|1|A28S|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOR|1|A28S|A|732
7TOR|1|A28S|A|733
7TOR|1|A28S|G|734
7TOR|1|A28S|G|735
*
7TOR|1|A28S|C|928
7TOR|1|A28S|A|929
7TOR|1|A28S|G|930
7TOR|1|A28S|C|931
7TOR|1|A28S|A|932
7TOR|1|A28S|G|933
7TOR|1|A28S|C|934
7TOR|1|A28S|A|935
7TOR|1|A28S|G|935|||A
7TOR|1|A28S|C|936
7TOR|1|A28S|U|937

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL04

60S ribosomal protein L4

Chain AL14

60S ribosomal protein L14

Chain AL20

eL20