IL_7TOR_134
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGA*UGC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOR_134 not in the Motif Atlas
- Geometric match to IL_3W3S_003
- Geometric discrepancy: 0.2018
- The information below is about IL_3W3S_003
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_10167.6
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 51
Unit IDs
7TOR|1|A28S|G|1173
7TOR|1|A28S|G|1174
7TOR|1|A28S|A|1175
*
7TOR|1|A28S|U|1186
7TOR|1|A28S|G|1187
7TOR|1|A28S|C|1188
Current chains
- Chain A28S
- 28S rRNA
Nearby chains
- Chain AL05
- 60S ribosomal protein L5
Coloring options: