IL_7TOR_148
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUU*AUA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOR_148 not in the Motif Atlas
- Homologous match to IL_8C3A_037
- Geometric discrepancy: 0.0914
- The information below is about IL_8C3A_037
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7TOR|1|A28S|U|1671
7TOR|1|A28S|U|1672
7TOR|1|A28S|U|1673
*
7TOR|1|A28S|A|1682
7TOR|1|A28S|U|1683
7TOR|1|A28S|A|1684
Current chains
- Chain A28S
- 28S rRNA
Nearby chains
- Chain AL13
- 60S ribosomal protein L13
- Chain AL18
- eL18
- Chain AL21
- 60S ribosomal protein L21
- Chain AL28
- 60S ribosomal protein L27a
- Chain AL29
- eL29
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