IL_7TOR_213
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GA*UAC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOR_213 not in the Motif Atlas
- Homologous match to IL_8C3A_107
- Geometric discrepancy: 0.1078
- The information below is about IL_8C3A_107
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
7TOR|1|A28S|G|4191
7TOR|1|A28S|A|4192
*
7TOR|1|A28S|U|4202
7TOR|1|A28S|A|4203
7TOR|1|A28S|C|4204
Current chains
- Chain A28S
- 28S rRNA
Nearby chains
- Chain AL10
- Ribosomal protein L10
- Chain AL21
- 60S ribosomal protein L21
- Chain AL29
- eL29
- Chain AL42
- eL42
Coloring options: