IL_7TOR_229
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 7TOR|1|A28S|A|4548
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOR_229 not in the Motif Atlas
- Geometric match to IL_7RQB_101
- Geometric discrepancy: 0.2282
- The information below is about IL_7RQB_101
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_37497.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 118
Unit IDs
7TOR|1|A28S|C|4537
7TOR|1|A28S|G|4538
*
7TOR|1|A28S|C|4547
7TOR|1|A28S|A|4548
7TOR|1|A28S|G|4549
Current chains
- Chain A28S
- 28S rRNA
Nearby chains
- Chain AL02
- 60S ribosomal protein L8
- Chain GR1
- GR20, ALS/FTD dipeptide repeat protein
- Chain PTRN
- Transfer RNA; tRNA
Coloring options: