IL_7TOR_250

3D structure

PDB id

7TOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

7TOR|1|A28S|G|5041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOR|1|A28S|U|5003
7TOR|1|A28S|C|5004
7TOR|1|A28S|G|5005
7TOR|1|A28S|U|5006
7TOR|1|A28S|A|5007
7TOR|1|A28S|C|5008
7TOR|1|A28S|G|5009
*
7TOR|1|A28S|U|5039
7TOR|1|A28S|U|5040
7TOR|1|A28S|G|5041
7TOR|1|A28S|A|5042
7TOR|1|A28S|A|5043
7TOR|1|A28S|A|5044

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL03

60S ribosomal protein L3

Chain AL24

Ribosomal protein L24

Chain AL31

60S ribosomal protein L31