IL_7TQL_077

3D structure

PDB id

7TQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human 40S small ribosomal subunit in complex with translation initiation factors eIF1A and eIF5B.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUC*GUAACC

Length

9 nucleotides

Bulged bases

7TQL|1|2|A|1580

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TQL|1|2|G|1550
7TQL|1|2|U|1551
7TQL|1|2|C|1558
*
7TQL|1|2|G|1577
7TQL|1|2|U|1578
7TQL|1|2|A|1579
7TQL|1|2|A|1580
7TQL|1|2|C|1581
7TQL|1|2|C|1582

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain F

40S ribosomal protein S3

Chain V

ribosomal protein uS10

Chain f

ribosomal protein uS14