IL_7TQL_093
3D structure
- PDB id
- 7TQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human 40S small ribosomal subunit in complex with translation initiation factors eIF1A and eIF5B.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGC*GCAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TQL_093 not in the Motif Atlas
- Geometric match to IL_5ML7_010
- Geometric discrepancy: 0.3504
- The information below is about IL_5ML7_010
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_68118.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 29
Unit IDs
7TQL|1|2|G|1235
7TQL|1|2|G|1236
7TQL|1|2|C|1237
*
7TQL|1|2|G|1520
7TQL|1|2|C|1521
7TQL|1|2|A|1522
7TQL|1|2|C|1523
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 3
- Transfer RNA; tRNA
- Chain 4
- Translation initiation factor eIF1A
- Chain Q
- 40S ribosomal protein S15
- Chain T
- ribosomal protein uS13
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