IL_7TTU_021

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TTU_021 not in the Motif Atlas

Geometric match to IL_4WF9_024

Geometric discrepancy: 0.0994

The information below is about IL_4WF9_024

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

7TTU|1|1|U|748
7TTU|1|1|G|749
7TTU|1|1|A|750
7TTU|1|1|A|751
7TTU|1|1|G|752
*
7TTU|1|1|U|769
7TTU|1|1|G|770
7TTU|1|1|G|771
7TTU|1|1|A|772
7TTU|1|1|G|773

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L2