IL_7TTU_044

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUAAG*CGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TTU_044 not in the Motif Atlas

Geometric match to IL_7A0S_048

Geometric discrepancy: 0.1571

The information below is about IL_7A0S_048

Detailed Annotation

UAA/GAN

Broad Annotation

UAA/GAN

Motif group

IL_89021.2

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7TTU|1|1|C|1388
7TTU|1|1|U|1389
7TTU|1|1|A|1390
7TTU|1|1|A|1391
7TTU|1|1|G|1392
*
7TTU|1|1|C|1413
7TTU|1|1|G|1414
7TTU|1|1|A|1415
7TTU|1|1|U|1416
7TTU|1|1|G|1417

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L2

Chain P

50S ribosomal protein L34