IL_7TTU_047

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUAGG*CACAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TTU_047 not in the Motif Atlas

Homologous match to IL_4WF9_122

Geometric discrepancy: 0.2467

The information below is about IL_4WF9_122

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_67780.1

Basepair signature

cWW-cSH-L-R-L-L-R-L

Number of instances in this motif group

1

Unit IDs

7TTU|1|1|G|1476
7TTU|1|1|U|1477
7TTU|1|1|A|1478
7TTU|1|1|G|1479
7TTU|1|1|G|1480
*
7TTU|1|1|C|1604
7TTU|1|1|A|1605
7TTU|1|1|C|1606
7TTU|1|1|A|1607
7TTU|1|1|C|1608

Current chains

Chain 1

23S rRNA

Nearby chains