IL_7TTU_048

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUAAGC*GUGAUGG

Length

13 nucleotides

Bulged bases

7TTU|1|1|G|1569

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TTU_048 not in the Motif Atlas

Geometric match to IL_4WF9_058

Geometric discrepancy: 0.1763

The information below is about IL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_88190.1

Basepair signature

cWW-L-R-tHS-L-R-L-R-cWW

Number of instances in this motif group

1

Unit IDs

7TTU|1|1|C|1511
7TTU|1|1|U|1512
7TTU|1|1|A|1513
7TTU|1|1|A|1514
7TTU|1|1|G|1515
7TTU|1|1|C|1516
*
7TTU|1|1|G|1564
7TTU|1|1|U|1565
7TTU|1|1|G|1566
7TTU|1|1|A|1567
7TTU|1|1|U|1568
7TTU|1|1|G|1569
7TTU|1|1|G|1570

Current chains

Chain 1

23S rRNA

Nearby chains