IL_7TTU_061

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUAAG*CGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TTU_061 not in the Motif Atlas

Geometric match to IL_4WF9_073

Geometric discrepancy: 0.1287

The information below is about IL_4WF9_073

Detailed Annotation

UAA/GAN with extra stack

Broad Annotation

No text annotation

Motif group

IL_89021.3

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

7

Unit IDs

7TTU|1|1|U|1878
7TTU|1|1|U|1879
7TTU|1|1|A|1880
7TTU|1|1|A|1881
7TTU|1|1|G|1882
*
7TTU|1|1|C|1914
7TTU|1|1|G|1915
7TTU|1|1|A|1916
7TTU|1|1|A|1917
7TTU|1|1|G|1918

Current chains

Chain 1

23S rRNA

Nearby chains