IL_7TTU_073

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAG*CGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TTU_073 not in the Motif Atlas

Geometric match to IL_4WF9_087

Geometric discrepancy: 0.1056

The information below is about IL_4WF9_087

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.2

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

43

Unit IDs

7TTU|1|1|C|2377
7TTU|1|1|G|2378
7TTU|1|1|A|2379
7TTU|1|1|G|2380
*
7TTU|1|1|C|2391
7TTU|1|1|G|2392
7TTU|1|1|A|2393
7TTU|1|1|G|2394

Current chains

Chain 1

23S rRNA

Nearby chains

Chain I

50S ribosomal protein L27

Chain Q

50S ribosomal protein L35