IL_7TTU_093

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGGAAG*UGGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TTU_093 not in the Motif Atlas

Geometric match to IL_4WF9_108

Geometric discrepancy: 0.1555

The information below is about IL_4WF9_108

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_48489.1

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

8

Unit IDs

7TTU|1|1|U|2867
7TTU|1|1|G|2868
7TTU|1|1|G|2869
7TTU|1|1|A|2870
7TTU|1|1|A|2871
7TTU|1|1|G|2872
*
7TTU|1|1|U|2885
7TTU|1|1|G|2886
7TTU|1|1|G|2887
7TTU|1|1|A|2888
7TTU|1|1|G|2889

Current chains

Chain 1

23S rRNA

Nearby chains

Chain A

50S ribosomal protein L19

Chain Z

50S ribosomal protein L17