IL_7TTU_103

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGUU*AAGUG

Length

9 nucleotides

Bulged bases

7TTU|1|1|G|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TTU_103 not in the Motif Atlas

Geometric match to IL_7KJT_003

Geometric discrepancy: 0.3175

The information below is about IL_7KJT_003

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_67085.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

56

Unit IDs

7TTU|1|1|C|1235
7TTU|1|1|G|1236
7TTU|1|1|U|1237
7TTU|1|1|U|1238
*
7TTU|1|1|A|1284
7TTU|1|1|A|1285
7TTU|1|1|G|1286
7TTU|1|1|U|1287
7TTU|1|1|G|1288

Current chains

Chain 1

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L20

Chain S

50S ribosomal protein L4

Chain X

50S ribosomal protein L15