IL_7TUT_019
3D structure
- PDB id
- 7TUT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome stalled on a 4-TMD Rhodopsin intermediate in complex with the multipass translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.88 Å
Loop
- Sequence
- GGUC*GCUAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TUT_019 not in the Motif Atlas
- Geometric match to IL_7MLW_007
- Geometric discrepancy: 0.3796
- The information below is about IL_7MLW_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_99358.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
7TUT|1|K|G|443
7TUT|1|K|G|444
7TUT|1|K|U|445
7TUT|1|K|C|446
*
7TUT|1|K|G|1300
7TUT|1|K|C|1301
7TUT|1|K|U|1302
7TUT|1|K|A|1303
7TUT|1|K|C|1304
Current chains
- Chain K
- 28S ribosomal RNA
Nearby chains
- Chain 4
- Coiled-coil domain containing 47
- Chain e
- eL32
- Chain f
- eL33
- Chain v
- 5.8S ribosomal RNA; 5.8S rRNA
Coloring options: