IL_7TUT_142

3D structure

PDB id

7TUT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit 80S ribosome stalled on a 4-TMD Rhodopsin intermediate in complex with the multipass translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.88 Å

Loop

Sequence

CGGAGC*GAACCUG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TUT|1|K|C|4739
7TUT|1|K|G|4740
7TUT|1|K|G|4743
7TUT|1|K|A|4744
7TUT|1|K|G|4745
7TUT|1|K|C|4746
*
7TUT|1|K|G|4954
7TUT|1|K|A|4955
7TUT|1|K|A|4956
7TUT|1|K|C|4957
7TUT|1|K|C|4958
7TUT|1|K|U|4959
7TUT|1|K|G|4960

Current chains

Chain K

28S ribosomal RNA

Nearby chains

Chain 4

Coiled-coil domain containing 47

Chain 5

WD repeat domain 83 opposite strand