3D structure

PDB id
7U0H (explore in PDB, NAKB, or RNA 3D Hub)
Description
State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model
Experimental method
ELECTRON MICROSCOPY
Resolution
2.76 Å

Loop

Sequence
GAGGUAAAG*UUAAAUAU
Length
17 nucleotides
Bulged bases
7U0H|1|1|A|1054
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7U0H|1|1|G|991
7U0H|1|1|A|992
7U0H|1|1|G|993
7U0H|1|1|G|994
7U0H|1|1|U|995
7U0H|1|1|A|996
7U0H|1|1|A|997
7U0H|1|1|A|998
7U0H|1|1|G|999
*
7U0H|1|1|U|1051
7U0H|1|1|U|1052
7U0H|1|1|A|1053
7U0H|1|1|A|1054
7U0H|1|1|A|1055
7U0H|1|1|U|1056
7U0H|1|1|A|1057
7U0H|1|1|U|1058

Current chains

Chain 1
25S rRNA

Nearby chains

Chain F
60S ribosomal protein L7-A
Chain S
60S ribosomal protein L20-A
Chain T
60S ribosomal protein L21-A

Coloring options:

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