3D structure

PDB id
7U0H (explore in PDB, NAKB, or RNA 3D Hub)
Description
State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model
Experimental method
ELECTRON MICROSCOPY
Resolution
2.76 Å

Loop

Sequence
GGGCCUUGGUC*GCCUUGGUGUCGC
Length
24 nucleotides
Bulged bases
7U0H|1|1|C|1964, 7U0H|1|1|U|2056, 7U0H|1|1|G|2076, 7U0H|1|1|U|2077
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7U0H|1|1|G|1961
7U0H|1|1|G|1962
7U0H|1|1|G|1963
7U0H|1|1|C|1964
7U0H|1|1|C|1965
7U0H|1|1|U|1966
7U0H|1|1|U|1967
7U0H|1|1|G|1968
7U0H|1|1|G|1969
7U0H|1|1|U|1970
7U0H|1|1|C|1971
*
7U0H|1|1|G|2052
7U0H|1|1|C|2053
7U0H|1|1|C|2054
7U0H|1|1|U|2055
7U0H|1|1|U|2056
7U0H|1|1|G|2057
7U0H|1|1|G|2058
7U0H|1|1|U|2059
7U0H|1|1|G|2076
7U0H|1|1|U|2077
7U0H|1|1|C|2078
7U0H|1|1|G|2079
7U0H|1|1|C|2080

Current chains

Chain 1
25S rRNA

Nearby chains

Chain q
Ribosome biogenesis protein NOP53

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0982 s