IL_7U0H_122

3D structure

PDB id

7U0H (explore in PDB, NAKB, or RNA 3D Hub)

Description

State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CGGGU*ACAAUUAACG

Length

15 nucleotides

Bulged bases

7U0H|1|1|C|2087, 7U0H|1|1|A|2088, 7U0H|1|1|A|2089, 7U0H|1|1|U|2090

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7U0H|1|1|C|1951
7U0H|1|1|G|1952
7U0H|1|1|G|1953
7U0H|1|1|G|1954
7U0H|1|1|U|1955
*
7U0H|1|1|A|2086
7U0H|1|1|C|2087
7U0H|1|1|A|2088
7U0H|1|1|A|2089
7U0H|1|1|U|2090
7U0H|1|1|U|2091
7U0H|1|1|A|2092
7U0H|1|1|A|2093
7U0H|1|1|C|2094
7U0H|1|1|G|2095

Current chains

Chain 1

25S rRNA

Nearby chains

Chain R

60S ribosomal protein L19-A

Chain q

Ribosome biogenesis protein NOP53