IL_7U2I_250

3D structure

PDB id

7U2I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

GCGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7U2I_250 not in the Motif Atlas

Homologous match to IL_8VTW_084

Geometric discrepancy: 0.4616

The information below is about IL_8VTW_084

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7U2I|1|2A|G|2110
7U2I|1|2A|C|2111
7U2I|1|2A|G|2112
7U2I|1|2A|U|2113
7U2I|1|2A|A|2114
7U2I|1|2A|G|2115
7U2I|1|2A|G|2116
7U2I|1|2A|A|2117
7U2I|1|2A|U|2118
7U2I|1|2A|A|2119
7U2I|1|2A|G|2120
*
7U2I|1|2A|C|2178
7U2I|1|2A|C|2179

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2y

Transfer RNA; tRNA