IL_7U2I_356

3D structure

PDB id

7U2I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

GGAACUCUG*CUGUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7U2I_356 not in the Motif Atlas

Homologous match to IL_9DFE_066

Geometric discrepancy: 0.07

The information below is about IL_9DFE_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22854.4

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

7

Unit IDs

7U2I|1|2A|G|1666
7U2I|1|2A|G|1667
7U2I|1|2A|A|1668
7U2I|1|2A|A|1669
7U2I|1|2A|C|1670
7U2I|1|2A|U|1671
7U2I|1|2A|C|1672
7U2I|1|2A|U|1673
7U2I|1|2A|G|1674
*
7U2I|1|2A|C|1990
7U2I|1|2A|U|1991
7U2I|1|2A|G|1992
7U2I|1|2A|U|1993
7U2I|1|2A|C|1994

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2E

50S ribosomal protein L3

Chain 2O

50S ribosomal protein L14