IL_7U2I_357

3D structure

PDB id

7U2I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

GGAGCCUGUGAACCC*GGGGGAGGCGCCGGUGAAAUAC

Length

37 nucleotides

Bulged bases

7U2I|1|2A|U|2132, 7U2I|1|2A|G|2168

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7U2I|1|2A|G|2124
7U2I|1|2A|G|2125
7U2I|1|2A|A|2126
7U2I|1|2A|G|2127
7U2I|1|2A|C|2128
7U2I|1|2A|C|2129
7U2I|1|2A|U|2130
7U2I|1|2A|G|2131
7U2I|1|2A|U|2132
7U2I|1|2A|G|2133
7U2I|1|2A|A|2134
7U2I|1|2A|A|2135
7U2I|1|2A|C|2136
7U2I|1|2A|C|2137
7U2I|1|2A|C|2138
*
7U2I|1|2A|G|2153
7U2I|1|2A|G|2154
7U2I|1|2A|G|2155
7U2I|1|2A|G|2156
7U2I|1|2A|G|2157
7U2I|1|2A|A|2158
7U2I|1|2A|G|2159
7U2I|1|2A|G|2160
7U2I|1|2A|C|2161
7U2I|1|2A|G|2162
7U2I|1|2A|C|2163
7U2I|1|2A|C|2164
7U2I|1|2A|G|2165
7U2I|1|2A|G|2166
7U2I|1|2A|U|2167
7U2I|1|2A|G|2168
7U2I|1|2A|A|2169
7U2I|1|2A|A|2170
7U2I|1|2A|A|2171
7U2I|1|2A|U|2172
7U2I|1|2A|A|2173
7U2I|1|2A|C|2174

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2y

Transfer RNA; tRNA