IL_7U2J_106
3D structure
- PDB id
- 7U2J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- GAUAAC*GGAAGC
- Length
- 12 nucleotides
- Bulged bases
- 7U2J|1|1A|A|2765
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7U2J_106 not in the Motif Atlas
- Geometric match to IL_7RQB_107
- Geometric discrepancy: 0.0333
- The information below is about IL_7RQB_107
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_49767.5
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7U2J|1|1A|G|2737
7U2J|1|1A|A|2738
7U2J|1|1A|U|2739
7U2J|1|1A|A|2740
7U2J|1|1A|A|2741
7U2J|1|1A|C|2742
*
7U2J|1|1A|G|2762
7U2J|1|1A|G|2763
7U2J|1|1A|A|2764
7U2J|1|1A|A|2765
7U2J|1|1A|G|2766
7U2J|1|1A|C|2767
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 19
- 50S ribosomal protein L36
- Chain 1H
- 50S ribosomal protein L6
- Chain 1N
- 50S ribosomal protein L13
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