IL_7U2J_362

3D structure

PDB id

7U2J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

GGAGCCUGUGAAC*GGGAGGCGCCGGUGAAAUAC

Length

33 nucleotides

Bulged bases

7U2J|1|2A|U|2132

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7U2J|1|2A|G|2124
7U2J|1|2A|G|2125
7U2J|1|2A|A|2126
7U2J|1|2A|G|2127
7U2J|1|2A|C|2128
7U2J|1|2A|C|2129
7U2J|1|2A|U|2130
7U2J|1|2A|G|2131
7U2J|1|2A|U|2132
7U2J|1|2A|G|2133
7U2J|1|2A|A|2134
7U2J|1|2A|A|2135
7U2J|1|2A|C|2136
*
7U2J|1|2A|G|2155
7U2J|1|2A|G|2156
7U2J|1|2A|G|2157
7U2J|1|2A|A|2158
7U2J|1|2A|G|2159
7U2J|1|2A|G|2160
7U2J|1|2A|C|2161
7U2J|1|2A|G|2162
7U2J|1|2A|C|2163
7U2J|1|2A|C|2164
7U2J|1|2A|G|2165
7U2J|1|2A|G|2166
7U2J|1|2A|U|2167
7U2J|1|2A|G|2168
7U2J|1|2A|A|2169
7U2J|1|2A|A|2170
7U2J|1|2A|A|2171
7U2J|1|2A|U|2172
7U2J|1|2A|A|2173
7U2J|1|2A|C|2174

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2y

Transfer RNA; tRNA