IL_7UCJ_023

3D structure

PDB id

7UCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S translation initiation complex with mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

7UCJ|1|5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCJ|1|5|A|466
7UCJ|1|5|U|467
7UCJ|1|5|U|468
7UCJ|1|5|C|469
7UCJ|1|5|A|470
7UCJ|1|5|A|471
7UCJ|1|5|C|472
*
7UCJ|1|5|G|682
7UCJ|1|5|C|683
7UCJ|1|5|G|684
7UCJ|1|5|C|685
7UCJ|1|5|A|686
7UCJ|1|5|U|687
7UCJ|1|5|U|688
7UCJ|1|5|U|689

Current chains

Chain 5

28s rRNA

Nearby chains

Chain E

60S ribosomal protein L6

Chain r

60S ribosomal protein L28