IL_7UCJ_024
3D structure
- PDB id
- 7UCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S translation initiation complex with mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCG*CCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UCJ_024 not in the Motif Atlas
- Geometric match to IL_5MWI_006
- Geometric discrepancy: 0.1549
- The information below is about IL_5MWI_006
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 259
Unit IDs
7UCJ|1|5|C|480
7UCJ|1|5|C|481|||A
7UCJ|1|5|G|482
*
7UCJ|1|5|C|672
7UCJ|1|5|C|673
7UCJ|1|5|G|674
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain r
- 60S ribosomal protein L28
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