IL_7UCJ_035

3D structure

PDB id

7UCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S translation initiation complex with mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AAGG*CAGCAGCAGCU

Length

15 nucleotides

Bulged bases

7UCJ|1|5|A|932, 7UCJ|1|5|A|935, 7UCJ|1|5|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCJ|1|5|A|732
7UCJ|1|5|A|733
7UCJ|1|5|G|734
7UCJ|1|5|G|735
*
7UCJ|1|5|C|928
7UCJ|1|5|A|929
7UCJ|1|5|G|930
7UCJ|1|5|C|931
7UCJ|1|5|A|932
7UCJ|1|5|G|933
7UCJ|1|5|C|934
7UCJ|1|5|A|935
7UCJ|1|5|G|935|||A
7UCJ|1|5|C|936
7UCJ|1|5|U|937

Current chains

Chain 5

28s rRNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain M

60S ribosomal protein L14

Chain S

60S ribosomal protein L18a