IL_7UCJ_045
3D structure
- PDB id
- 7UCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S translation initiation complex with mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- G(P4U)G*CAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UCJ_045 not in the Motif Atlas
- Homologous match to IL_8C3A_023
- Geometric discrepancy: 0.2711
- The information below is about IL_8C3A_023
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7UCJ|1|5|G|1347
7UCJ|1|5|P4U|1348
7UCJ|1|5|G|1349
*
7UCJ|1|5|C|1507
7UCJ|1|5|A|1508
7UCJ|1|5|C|1509
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain N
- 60S ribosomal protein L15
- Chain Q
- 60S ribosomal protein L18
- Chain a
- 60S ribosomal protein L27a
Coloring options: