IL_7UCJ_073

3D structure

PDB id

7UCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S translation initiation complex with mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUAA(P7G)G*CCCAUA

Length

12 nucleotides

Bulged bases

7UCJ|1|5|U|2070

QA status

Modified nucleotides: P7G

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCJ|1|5|U|1905
7UCJ|1|5|U|1906
7UCJ|1|5|A|1907
7UCJ|1|5|A|1908
7UCJ|1|5|P7G|1909
7UCJ|1|5|G|1910
*
7UCJ|1|5|C|2066
7UCJ|1|5|C|2067
7UCJ|1|5|C|2068
7UCJ|1|5|A|2069
7UCJ|1|5|U|2070
7UCJ|1|5|A|2071

Current chains

Chain 5

28s rRNA

Nearby chains

Chain 7

5S ribosomal RNA; 5S rRNA

Chain F

60S ribosomal protein L7

Chain Q

60S ribosomal protein L18

Chain e

60S ribosomal protein L32

Chain f

60S ribosomal protein L35a