IL_7UCJ_146

3D structure

PDB id

7UCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S translation initiation complex with mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

ACAU(PSU)U*AC(B8T)AU

Length

11 nucleotides

Bulged bases

7UCJ|1|5|C|4670

QA status

Modified nucleotides: PSU, B8T

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCJ|1|5|A|4624
7UCJ|1|5|C|4625
7UCJ|1|5|A|4626
7UCJ|1|5|U|4627
7UCJ|1|5|PSU|4628
7UCJ|1|5|U|4629
*
7UCJ|1|5|A|4669
7UCJ|1|5|C|4670
7UCJ|1|5|B8T|4671
7UCJ|1|5|A|4672
7UCJ|1|5|U|4673

Current chains

Chain 5

28s rRNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain V

60S ribosomal protein L23

Chain W

Ribosomal protein L24