IL_7UCJ_205

3D structure

PDB id

7UCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S translation initiation complex with mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGGGCAAGUC*GCU

Length

13 nucleotides

Bulged bases

7UCJ|1|9|U|607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCJ|1|9|A|599
7UCJ|1|9|G|600
7UCJ|1|9|G|601
7UCJ|1|9|G|602
7UCJ|1|9|C|603
7UCJ|1|9|A|604
7UCJ|1|9|A|605
7UCJ|1|9|G|606
7UCJ|1|9|U|607
7UCJ|1|9|C|608
*
7UCJ|1|9|G|635
7UCJ|1|9|C|636
7UCJ|1|9|U|637

Current chains

Chain 9

18S rRNA

Nearby chains

Chain CC

40S ribosomal protein S2

Chain DD

40S ribosomal protein S3

Chain Ee

40S ribosomal protein S30

Chain JJ

40S ribosomal protein S9