IL_7UCJ_238

3D structure

PDB id

7UCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S translation initiation complex with mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GACAGGA*UUC

Length

10 nucleotides

Bulged bases

7UCJ|1|9|G|1285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCJ|1|9|G|1281
7UCJ|1|9|A|1282
7UCJ|1|9|C|1283
7UCJ|1|9|A|1284
7UCJ|1|9|G|1285
7UCJ|1|9|G|1286
7UCJ|1|9|A|1287
*
7UCJ|1|9|U|1314
7UCJ|1|9|U|1315
7UCJ|1|9|C|1316

Current chains

Chain 9

18S rRNA

Nearby chains

Chain KK

40S ribosomal protein S10