IL_7UCJ_278

3D structure

PDB id

7UCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S translation initiation complex with mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAUAGACAGC*GCCGAA

Length

16 nucleotides

Bulged bases

7UCJ|1|5|A|1960

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCJ|1|5|U|1957
7UCJ|1|5|A|1958
7UCJ|1|5|U|1959
7UCJ|1|5|A|1960
7UCJ|1|5|G|1961
7UCJ|1|5|A|1962
7UCJ|1|5|C|1963
7UCJ|1|5|A|1964
7UCJ|1|5|G|1965
7UCJ|1|5|C|1966
*
7UCJ|1|5|G|2021
7UCJ|1|5|C|2022
7UCJ|1|5|C|2023
7UCJ|1|5|G|2024
7UCJ|1|5|A|2025
7UCJ|1|5|A|2026

Current chains

Chain 5

28s rRNA

Nearby chains

Chain m

60S ribosomal protein L40