3D structure

PDB id
7UCJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mammalian 80S translation initiation complex with mRNA and Harringtonine
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GA(PSU)*AC
Length
5 nucleotides
Bulged bases
7UCJ|1|5|A|4292
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7UCJ|1|5|G|4291
7UCJ|1|5|A|4292
7UCJ|1|5|PSU|4293
*
7UCJ|1|5|A|4317
7UCJ|1|5|C|4318

Current chains

Chain 5
28s rRNA

Nearby chains

Chain b
60S ribosomal protein L29
Chain o
60S ribosomal protein L36a

Coloring options:

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