IL_7UCJ_291
3D structure
- PDB id
- 7UCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S translation initiation complex with mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- (OMU)CC(PSU)U(OMU)*AUUCG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UCJ_291 not in the Motif Atlas
- Homologous match to IL_8P9A_382
- Geometric discrepancy: 0.2163
- The information below is about IL_8P9A_382
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31545.1
- Basepair signature
- cWW-L-R-L-cWW-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
7UCJ|1|9|OMU|116
7UCJ|1|9|C|117
7UCJ|1|9|C|118
7UCJ|1|9|PSU|119
7UCJ|1|9|U|120
7UCJ|1|9|OMU|121
*
7UCJ|1|9|A|343
7UCJ|1|9|U|344
7UCJ|1|9|U|345
7UCJ|1|9|C|346
7UCJ|1|9|G|347
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain EE
- 40S ribosomal protein S4
- Chain II
- 40S ribosomal protein S8
Coloring options: