IL_7UCK_052

3D structure

PDB id

7UCK (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S translation initiation complex with ac4c(-1) mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CC(OMG)A(A2M)AG*CUAGUAGCUG

Length

17 nucleotides

Bulged bases

7UCK|1|5|A|1650, 7UCK|1|5|G|1654

QA status

Modified nucleotides: OMG, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCK|1|5|C|1520
7UCK|1|5|C|1521
7UCK|1|5|OMG|1522
7UCK|1|5|A|1523
7UCK|1|5|A2M|1524
7UCK|1|5|A|1525
7UCK|1|5|G|1526
*
7UCK|1|5|C|1648
7UCK|1|5|U|1649
7UCK|1|5|A|1650
7UCK|1|5|G|1651
7UCK|1|5|U|1652
7UCK|1|5|A|1653
7UCK|1|5|G|1654
7UCK|1|5|C|1655
7UCK|1|5|U|1656
7UCK|1|5|G|1657

Current chains

Chain 5

28s rRNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain L

60S ribosomal protein L13

Chain N

60S ribosomal protein L15

Chain a

60S ribosomal protein L27a

Chain j

60S ribosomal protein L37