IL_7UCK_105
3D structure
- PDB id
- 7UCK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGUAAC*GGAUAAG
- Length
- 13 nucleotides
- Bulged bases
- 7UCK|1|5|U|2880
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UCK_105 not in the Motif Atlas
- Geometric match to IL_4V9F_063
- Geometric discrepancy: 0.0963
- The information below is about IL_4V9F_063
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_20700.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 10
Unit IDs
7UCK|1|5|C|2867
7UCK|1|5|G|2868
7UCK|1|5|U|2869
7UCK|1|5|A|2870
7UCK|1|5|A|2871
7UCK|1|5|C|2872
*
7UCK|1|5|G|2877
7UCK|1|5|G|2878
7UCK|1|5|A|2879
7UCK|1|5|U|2880
7UCK|1|5|A|2881
7UCK|1|5|A|2882
7UCK|1|5|G|2883
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain 9
- Small subunit ribosomal RNA; SSU rRNA
- Chain n
- eL41
- Chain p
- 60S ribosomal protein L37a
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