IL_7UCK_114

3D structure

PDB id

7UCK (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S translation initiation complex with ac4c(-1) mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

G(PSU)CA(A2M)AGU*AAUGAAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCK|1|5|G|3714
7UCK|1|5|PSU|3715
7UCK|1|5|C|3716
7UCK|1|5|A|3717
7UCK|1|5|A2M|3718
7UCK|1|5|A|3719
7UCK|1|5|G|3720
7UCK|1|5|U|3721
*
7UCK|1|5|A|3732
7UCK|1|5|A|3733
7UCK|1|5|U|3734
7UCK|1|5|G|3735
7UCK|1|5|A|3736
7UCK|1|5|A|3737
7UCK|1|5|G|3738
7UCK|1|5|C|3739

Current chains

Chain 5

28s rRNA

Nearby chains

Chain i

60S ribosomal protein L36

Chain o

60S ribosomal protein L36a