IL_7UCK_132
3D structure
- PDB id
- 7UCK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GGC(PSU)UG*UGA(PSU)CC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UCK_132 not in the Motif Atlas
- Homologous match to IL_8GLP_142
- Geometric discrepancy: 0.337
- The information below is about IL_8GLP_142
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7UCK|1|5|G|4400
7UCK|1|5|G|4401
7UCK|1|5|C|4402
7UCK|1|5|PSU|4403
7UCK|1|5|U|4404
7UCK|1|5|G|4405
*
7UCK|1|5|U|4439
7UCK|1|5|G|4440
7UCK|1|5|A|4441
7UCK|1|5|PSU|4442
7UCK|1|5|C|4443
7UCK|1|5|C|4444
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain I
- Ribosomal protein L10
- Chain b
- 60S ribosomal protein L29
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