IL_7UCK_195
3D structure
- PDB id
- 7UCK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UUUCGA*UG
- Length
- 8 nucleotides
- Bulged bases
- 7UCK|1|9|U|368, 7UCK|1|9|C|369
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UCK_195 not in the Motif Atlas
- Geometric match to IL_5Y58_001
- Geometric discrepancy: 0.2552
- The information below is about IL_5Y58_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37738.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7UCK|1|9|U|366
7UCK|1|9|U|367
7UCK|1|9|U|368
7UCK|1|9|C|369
7UCK|1|9|G|370
7UCK|1|9|A|371
*
7UCK|1|9|U|393
7UCK|1|9|G|394
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain II
- 40S ribosomal protein S8
- Chain LL
- 40S ribosomal protein S11
- Chain R
- 60S ribosomal protein L19
Coloring options: