3D structure

PDB id
7UCK (explore in PDB, NAKB, or RNA 3D Hub)
Description
80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
UAUAGACAGC*GCCGAA
Length
16 nucleotides
Bulged bases
7UCK|1|5|A|1960
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7UCK|1|5|U|1957
7UCK|1|5|A|1958
7UCK|1|5|U|1959
7UCK|1|5|A|1960
7UCK|1|5|G|1961
7UCK|1|5|A|1962
7UCK|1|5|C|1963
7UCK|1|5|A|1964
7UCK|1|5|G|1965
7UCK|1|5|C|1966
*
7UCK|1|5|G|2021
7UCK|1|5|C|2022
7UCK|1|5|C|2023
7UCK|1|5|G|2024
7UCK|1|5|A|2025
7UCK|1|5|A|2026

Current chains

Chain 5
28s rRNA

Nearby chains

Chain S
60S ribosomal protein L18a
Chain m
60S ribosomal protein L40

Coloring options:

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