IL_7UG6_009

3D structure

PDB id

7UG6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UG*UUUGUA

Length

8 nucleotides

Bulged bases

7UG6|1|1|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UG6_009 not in the Motif Atlas

Homologous match to IL_8C3A_010

Geometric discrepancy: 0.574

The information below is about IL_8C3A_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_33817.1

Basepair signature

cWW-R-L-L-L

Number of instances in this motif group

1

Unit IDs

7UG6|1|1|U|169
7UG6|1|1|G|170
*
7UG6|1|1|U|248
7UG6|1|1|U|249
7UG6|1|1|U|250
7UG6|1|1|G|251
7UG6|1|1|U|252
7UG6|1|1|A|253

Current chains

Chain 1

25S rRNA

Nearby chains

Chain G

60S ribosomal protein L8-A

Chain L

60S ribosomal protein L13-A

Chain h

60S ribosomal protein L35-A